Monday, February 25, 2008
In collaboration with Dr. Dimitris Anastassiou (EE, Columbia), we just published a paper on "Identification of gene interactions associated with disease from gene expression data using synergy networks" in BMC System Biology.
Tuesday, February 19, 2008
Here are some references on this technology for my own use.
- Global Identification of Human Transcribed Sequences with Genome Tiling Arrays
Science 24 December 2004:Vol. 306. no. 5705, pp. 2242 - 2246
Paul Bertone,1* Viktor Stolc,1,2* Thomas E. Royce,3 Joel S. Rozowsky,3 Alexander E. Urban,1 Xiaowei Zhu,1 John L. Rinn,3 Waraporn Tongprasit,4 Manoj Samanta,2 Sherman Weissman,5 Mark Gerstein,3 Michael Snyder1,3
- Array of hope
Nature Genetics 21, 3 - 4 (1999)
E. S. Lander
- Model-based analysis of tiling-arrays for ChIP-chip
PNAS August 15, 2006 vol. 103 no. 33 12457-12462
W. Evan Johnson*,,, Wei Li*,,, Clifford A. Meyer*,,, Raphael Gottardo, Jason S. Carroll¶, Myles Brown¶, and X. Shirley Liu*,,